Finds all pairs within a cluster (famly) with the proband (case/control)

second column of pairs are the probands and the first column the related subjects

familyclusterWithProbands.index(
  clusters,
  probands,
  index.type = FALSE,
  num = NULL,
  Rindex = 1
)

Arguments

clusters

list of indeces giving the clusters (families)

probands

list of 0,1 where 1 specifices which of the subjects that are probands

index.type

argument passed to other functions

num

argument passed to other functions

Rindex

index starts with 1, in C is it is 0

References

Cluster indeces

See also

familycluster.index cluster.index

Author

Klaus Holst, Thomas Scheike

Examples

i<-c(1,1,2,2,1,3)
p<-c(1,0,0,1,0,1)
d<- familyclusterWithProbands.index(i,p)
print(d)
#> $familypairindex
#> [1] 2 1 5 1 3 4
#> 
#> $subfamilyindex
#> [1] 0 0 1 1 3 3
#> 
#> $pairs
#>      [,1] [,2]
#> [1,]    2    1
#> [2,]    5    1
#> [3,]    3    4
#> 
#> $clusters
#> [1] 1 1 2
#>